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Online NGS Courses

ArrayGen > Services > Online NGS Courses

     
  Online NGS Courses
Next Generation Sequencing (NGS), a recently evolved technology, have served a lot in the research and development sector of our society. NGS methods are highly parallelized enabling to sequence thousands to millions of molecules simultaneously. This technology results into huge amount of data, which need to be analysed to conclude valuable information. Analysis of NGS data unravels important clues in quest for the treatment of various life-threatening diseases; improved crop varieties and other related scientific problems related to human welfare.


Participants will be introduced with its applicability to real-time data analysis problem. All our training content is as per industrial requirement and 100% practical exposure which will help candidate to make their better career in the field of bioinformatics.

More than 50+ candidates have taken this course and have successfully build their career in Bioinformatics.

Hurry up and register soon...To become expert in Bioinformatics !


RNA-Seq (Reference Based) Online Training Information
Period Of Training
15 days
Training Schedule
2 Hours Daily (One To One Training)
Training Mode
Online(For online training candidate have to install Skype and AnyDesk)
Training Fees
For course fee please request you to contact us at info@arraygen.com
Training Starting Date
Registration - Open

Training can be started on any date any timing as per the candidate convenience
Module-I

Advanced Bioinformatics
- Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)
- Gene Prediction
- Genome Annotation
- Genome Vizualization
- Basic Perl programming
- Unix based commands
Module-II

RNASeq Data Analysis
- Overview of NGS & detailed understanding
- Data Retrieval (NCBI SRA) & Data types
- Read Quality Check (FastQC & Cutadapt)
- Alignment of reads using reference Genome (Tophat)
- Visualization of mapped reads (UCSC & IGV)
- Gene Expression Quantification (Coverage, FPKM)
- Differential expression analysis (Cufflink, cuffmerge & cuffdiff)
- Pathway & Gene ontology enrichment analysis
- Pathway Network Analysis
- Basics on R programming
- Different plots (Heatmap,volcano plot etc) using CummeRbund &   R
Eligibility
B.Sc. / M.Sc. Biotech / Microbiology / Chemistry / Biochemistry / Botany / Zoology / Bioinformatics / Genetics / Any Life sciences graduates & Postgraduates/ Biomedical Genetics / Molecular Science / Biosciences) B.Tech., (Biotechnology / Industrial Biotechnology / Bioinformatics) B. Pharmacy / M. Pharmacy.
Industrial Exposure
100% based on Industrial exposure/Research
Certificate
All the participants will receive certificates on successful completion of training
Payment Options
Paypal/Wire Transfer/cheque

RNA-Seq (Denovo Based) Online Training Information
Period Of Training
15 days
Training Schedule
2 Hours Daily (One To One Training)
Training Mode
Online(For online training candidate have to install Skype and AnyDesk)
Training Fees
For course fee please request you to contact us at info@arraygen.com
Training Starting Date
Registration - Open

Training can be started on any date any timing as per the candidate convenience
Module-I

Advanced Bioinformatics
- Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)
- Gene Prediction
- Genome Annotation
- Genome Vizualization
- Basic Perl programming
- Unix based commands
Module-II

RNASeq Data Analysis
- Overview of NGS & detailed understanding
- Data Retrieval (NCBI SRA) & Data types
- Read Quality Check (FastQC & Cutadapt)
- Read Transcriptome Assembly (Trinity)
- Visualization of mapped reads on Assembled Transcriptome(UCSC & IGV)
- Gene Expression Quantification (Coverage, FPKM)
- Differential expression analysis (EdgeR / DESeq2)
- Pathway & Gene ontology enrichment analysis
- Pathway Network Analysis
- Basics on R programming
- Different plots (Heatmap,volcano plot etc) using R
Eligibility
B.Sc. / M.Sc. Biotech / Microbiology / Chemistry / Biochemistry / Botany / Zoology / Bioinformatics / Genetics / Any Life sciences graduates & Postgraduates/ Biomedical Genetics / Molecular Science / Biosciences) B.Tech., (Biotechnology / Industrial Biotechnology / Bioinformatics) B. Pharmacy / M. Pharmacy.
Industrial Exposure
100% based on Industrial exposure/Research
Certificate
All the participants will receive certificates on successful completion of training
Payment Options
Paypal/Wire Transfer/cheque

DNASeq(Genome Variant detection) Online Training Information
Period Of Training
15 days
Training Schedule
2 Hours Daily (One To One Training)
Training Mode
Online(For online training candidate have to install Skype and AnyDesk)
Training Fees
For course fee please request you to contact us at info@arraygen.com
Training Starting Date
Registration - Open

Training can be started on any date any timing as per the candidate convenience
Module-I

Advanced Bioinformatics
- Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)
- Gene Prediction
- Genome Annotation
- Genome Vizualization
- Basic Perl programming
- Unix based commands
Module-II

Genome Variant Detection
- Overview of NGS
- Data Retrieval (NCBI SRA) & Introduction to data types
- Read Quality Check (FastQC & Cutadapt)
- Alignment of reads using reference Genome (BWA/Bowtie)
- Understanding Mapping Output(SAM/BAM, Samtools & Bedtools)
- Variant detection using GATK & Samtools
- Visualization of variation with ArrayGen Genome Browser / IGV
- Complete annotation and variant effect prediction(SNPEff, SNPDB etc)
- Predict the effects of coding non-synonymous variants on protein function using
   the SIFT algorithm
Eligibility
B.Sc. / M.Sc. Biotech / Microbiology / Chemistry / Biochemistry / Botany / Zoology / Bioinformatics / Genetics / Any Life sciences graduates & Postgraduates/ Biomedical Genetics / Molecular Science / Biosciences) B.Tech., (Biotechnology / Industrial Biotechnology / Bioinformatics) B. Pharmacy / M. Pharmacy.
Industrial Exposure
100% based on Industrial exposure/Research
Certificate
All the participants will receive certificates on successful completion of training
Payment Options
Paypal/Wire Transfer/cheque

ChipSeq Online Training Information
Period Of Training
15 days
Training Schedule
2 Hours Daily (One To One Training)
Training Mode
Online(For online training candidate have to install Skype and AnyDesk)
Training Fees
For course fee please request you to contact us at info@arraygen.com
Training Starting Date
Registration - Open

Training can be started on any date any timing as per the candidate convenience
Module-I

Advanced Bioinformatics
- Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)
- Gene Prediction
- Genome Annotation
- Genome Vizualization
- Basic Perl programming
- Unix based commands
Module-II

ChipSeq Data Analysis
- Overview of NGS
- Basics of DNA-protein binding & ChipSeq data analysis workflow
- Quality Control of the reads and statistics(FastQC/cutadapt/NGSToolkit)
- Alignment of ChipSeq data- Details of the tools and steps of alignment(Bowtie)
- File format of the aligned files(SAM/BAM)
- Peak calling with MACS and In-house algorithm
- Annotation of all DNA-protein binding regions based on gene/exon/intron/promoter
- Visualizing the peaks in a genome browser(UCSC/IGV/ArrayGen Genome Browser)
- Motif Analysis in enriched peaks
Eligibility
B.Sc. / M.Sc. Biotech / Microbiology / Chemistry / Biochemistry / Botany / Zoology / Bioinformatics / Genetics / Any Life sciences graduates & Postgraduates/ Biomedical Genetics / Molecular Science / Biosciences) B.Tech., (Biotechnology / Industrial Biotechnology / Bioinformatics) B. Pharmacy / M. Pharmacy.
Industrial Exposure
100% based on Industrial exposure/Research
Certificate
All the participants will receive certificates on successful completion of training
Payment Options
Paypal/Wire Transfer/cheque

MethylSeq Online Training Information
Period Of Training
15 days
Training Schedule
2 Hours Daily (One To One Training)
Training Mode
Online(For online training candidate have to install Skype and AnyDesk)
Training Fees
For course fee please request you to contact us at info@arraygen.com
Training Starting Date
Registration - Open

Training can be started on any date any timing as per the candidate convenience
Module-I

Advanced Bioinformatics
- Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)
- Gene Prediction
- Genome Annotation
- Genome Vizualization
- Basic Perl programming
- Unix based commands
Module-II

MethylSeq Data Analysis
- Overview of NGS - Basics of DNA Methylation & Concept of Bisulphite conversion
- Read Quality Check(FastQC/Trim galore/cutadapt)
- Alignment of Methylation data- Details of the tools and steps of alignment(BisMark)
- File format of the aligned files(SAM/BAM)
- Analysis of bisulphite conversion after alignment
- QC filters to improve the quality of the data
- Downstream analysis- Identify differentially methylated regions, fragment based,
   CpG based and window based analysis(Methylkit/DMAP)
- Annotation of all CpG regions based on gene/exon/intron/promoter
- Compare differential methylation between two groups
- Statistically significant methylated genes
- Analyzing the Expression and Methylation data from TCGA for validation with experimental data
Eligibility
B.Sc. / M.Sc. Biotech / Microbiology / Chemistry / Biochemistry / Botany / Zoology / Bioinformatics / Genetics / Any Life sciences graduates & Postgraduates/ Biomedical Genetics / Molecular Science / Biosciences) B.Tech., (Biotechnology / Industrial Biotechnology / Bioinformatics) B. Pharmacy / M. Pharmacy.
Industrial Exposure
100% based on Industrial exposure/Research
Certificate
All the participants will receive certificates on successful completion of training
Payment Options
Paypal/Wire Transfer/cheque

Metagenomics Online Training Information
Period Of Training
15 days
Training Schedule
2 Hours Daily (One To One Training)
Training Mode
Online(For online training candidate have to install Skype and AnyDesk)
Training Fees
For course fee please request you to contact us at info@arraygen.com
Training Starting Date
Registration - Open

Training can be started on any date any timing as per the candidate convenience
Module-I

Advanced Bioinformatics
- Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)
- Gene Prediction
- Genome Annotation
- Genome Vizualization
- Basic Perl programming
- Unix based commands
- Basic R programming
Module-II

Metagenomics Data Analysis
- Introduction to Metagenomics
- Quality Check & Filtering
- Identification of rRNA sequence from reads
- OTUs identification & Functional assignment
- Taxonomic composition and relative abundance analysis
- Diversity Analysis
- Taxonomic Heatmap Analysis
- Estimation of species richness and sampling depth analysis
- Phylogenetic Analysis of Identified community
Eligibility
B.Sc. / M.Sc. Biotech / Microbiology / Chemistry / Biochemistry / Botany / Zoology / Bioinformatics / Genetics / Any Life sciences graduates & Postgraduates/ Biomedical Genetics / Molecular Science / Biosciences) B.Tech., (Biotechnology / Industrial Biotechnology / Bioinformatics) B. Pharmacy / M. Pharmacy.
Industrial Exposure
100% based on Industrial exposure/Research
Certificate
All the participants will receive certificates on successful completion of training
Payment Options
Paypal/Wire Transfer/cheque

Altogether we will prepare a customized course based on the needs and interests of your team. You can choose between available training packages and specify additional topics of interest. Based on your wishes, we will design a personalized course, select suitable experts and work out course materials.

The training will be conducted on your site using either sample data provided by us or using one of your live datasets. You only need to take care of an auditory and the required hardware for your employees.



We also offer customised online training in NGS data analysis, if participant want to perform analysis with their own raw data and want to learn NGS data analysis on it. Please send us inquiry and one of our business executive will contact you soon.




 
 
 
 
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