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Metagenomics Courses

ArrayGen > Services > Metagenomics Courses

     
  Metagenomics Courses
Metagenomics (also referred to as environmental and community genomics) is the genomic analysis of microorganisms by direct extraction and cloning of DNA from an assemblage of microorganisms. The development of metagenomics stemmed from the ineluctable evidence that as-yet-uncultured microorganisms represent the vast majority of organisms in most environments on earth. Metagenomics applies a suite of genomic technologies and bioinformatics tools to directly access the genetic content of entire communities of organisms.


Participants will be introduced with its applicability to real-time data analysis problem. All our training content is as per industrial requirement and 100% practical exposure which will help candidate to make their better career in the field of bioinformatics.

More than 750+ candidates have taken this course and have successfully build their career in Bioinformatics.

Hurry up and register soon...To become expert in Bioinformatics !


## 10% Discount if you register before 25th June, 2021. Hurry up!!



Targeted metagenomics Online Training Information
Period Of Training
15 days
Training Schedule
2 Hours Daily (One To One Training)
Training Mode
Online(For online training candidate have to install Skype and AnyDesk)
Training Fees
For course fee please request you to contact us at info@arraygen.com
Training Starting Date
Registration - Open

Training can be started on any date any timing as per the candidate convenience
Module-I

Advanced Bioinformatics
- Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)
- Gene Prediction
- Genome Annotation
- Genome Vizualization
- Hands on practical for Perl / Python / Java programming
- Unix based commands for NGS data analysis
Module-III

Targeted metagenomics
- Introduction to Metagenomics
- Quality Check & Filtering (FastQC, Cutadapt)
- Prepare mapping file containing features and barcodes
- Demultiplexing and quality filtering sequence reads
- OTUs identification (Qiime)
- Retrive analysis summary from BIOM file
- Diversity Analysis
- Taxonomic composition and relative abundance plots
- Taxonomic Heatmap Analysis
- Estimation of species richness and sampling depth analysis
- Phylogenetic Analysis of Identified community (MEGA, iTOL)
- Species enrichment plots for each sample (KRONA)
Eligibility
B.Sc. / M.Sc. Biotech / Microbiology / Chemistry / Biochemistry / Botany / Zoology / Bioinformatics / Genetics / Any Life sciences graduates & Postgraduates/ Biomedical Genetics / Molecular Science / Biosciences) B.Tech., (Biotechnology / Industrial Biotechnology / Bioinformatics) B. Pharmacy / M. Pharmacy.
Industrial Exposure
100% based on Industrial exposure/Research
Certificate
All the participants will receive certificates on successful completion of training
Payment Options
Paypal/Wire Transfer/cheque

Whole Genome Metagenomics Training Information
Period Of Training
15 days
Training Schedule
2 Hours Daily (One To One Training)
Training Mode
Online(For online training candidate have to install Skype and AnyDesk)
Training Fees
For course fee please request you to contact us at info@arraygen.com
Training Starting Date
Registration - Open

Training can be started on any date any timing as per the candidate convenience
Module-I

Advanced Bioinformatics
- Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)
- Gene Prediction
- Genome Annotation
- Genome Vizualization
- Hands on practical for Perl / Python / Java programming
- Unix based commands for NGS data analysis
Module-III

Whole Genome Metagenomics
- Introduction to Metagenomics
- Quality Check & Filtering (FastQC, Cutadapt)
- Assembling the metagenomes ( SqueezeMeta )
- Taxonomic binning of the communities (NR,COG,KEGG Database)
- Clustered into genome bins
- Bin refinement
- Visualize the community and the extracted bins (R and Anvio)
- Find the abundaces of the draft genomes (bins) across the samples
- Re-assemble the consolidated bin set & Vizualization of bin
- Determine the taxonomy of each bin
- Functional annotation of bins
- Pathway enrichment
- Phylogenetic analysis
Eligibility
B.Sc. / M.Sc. Biotech / Microbiology / Chemistry / Biochemistry / Botany / Zoology / Bioinformatics / Genetics / Any Life sciences graduates & Postgraduates/ Biomedical Genetics / Molecular Science / Biosciences) B.Tech., (Biotechnology / Industrial Biotechnology / Bioinformatics) B. Pharmacy / M. Pharmacy.
Industrial Exposure
100% based on Industrial exposure/Research
Certificate
All the participants will receive certificates on successful completion of training
Payment Options
Paypal/Wire Transfer/cheque

Metatranscriptomics Training Information
Period Of Training
15 days
Training Schedule
2 Hours Daily (One To One Training)
Training Mode
Online(For online training candidate have to install Skype and AnyDesk)
Training Fees
For course fee please request you to contact us at info@arraygen.com
Training Starting Date
Registration - Open

Training can be started on any date any timing as per the candidate convenience
Module-I

Advanced Bioinformatics
- Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)
- Gene Prediction
- Genome Annotation
- Genome Vizualization
- Basic Perl / Python programming
- Unix based commands
Module-III

Metatranscriptomics
- Introduction to Metatranscriptomics
- Merging PE reads (PEAR)
- Quality Check & Filtering (FastQC, Cutadapt, trimmomatic)
- Remove rRNA reads (SortMeRNA )
- Annotation using NCBI Refseq and SEED subsystem (DIAMOND)
- Differential gene expression (DESeq2)
- Identify profile specific organisms in regard to their transcript abundances (SAMSA2)
- Functional annotation and gene set enrichment (DAVID)
- Pathway enrichment
- Volcano plot, Heatmap
Eligibility
B.Sc. / M.Sc. Biotech / Microbiology / Chemistry / Biochemistry / Botany / Zoology / Bioinformatics / Genetics / Any Life sciences graduates & Postgraduates/ Biomedical Genetics / Molecular Science / Biosciences) B.Tech., (Biotechnology / Industrial Biotechnology / Bioinformatics) B. Pharmacy / M. Pharmacy.
Industrial Exposure
100% based on Industrial exposure/Research
Certificate
All the participants will receive certificates on successful completion of training
Payment Options
Paypal/Wire Transfer/cheque

Altogether we will prepare a customized course based on the needs and interests of your team. You can choose between available training packages and specify additional topics of interest. Based on your wishes, we will design a personalized course, select suitable experts and work out course materials.

The training will be conducted on your site using either sample data provided by us or using one of your live datasets. You only need to take care of an auditory and the required hardware for your employees.



         

We also offer customised online training in NGS data analysis, if participant want to perform analysis with their own raw data and want to learn NGS data analysis on it. Please send us inquiry and one of our business executive will contact you soon.




 
 
 
 
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