Genome wide determination of the genetic makeup of an un-known microbial iso-lates
Determine novel genomes and multiple genomes in a mixture
Validate the gene context of an unknown genome from re-sequencing next generation sequencing (NGS) data using microarrays
Arrays designed according to gene contexts of an unknown genome of interest to the customer
Cluster generation using CD-Hit and our own in-house propriatory tool
60-mer probe length
Probe selection based on %TM, %GC, PolyX, 3' end, self hybridization, nonoverlaping and high hybridization specificity
Removal of probes in repeat-masked and vector-masked regions
In silico hybridization check for each probe by BLASTN
We design one probe per target ( Core, Accessory and Unique ) regions. In case you would like to add more than one probe for each target, please let us know.
We also include additional probes for technical QC
Control probes are added based on platform specific protocol. In case you would like to add your own control probes, please let us know.
Complete annotation of designed probes for fast and easy data interpretation
High confidence in the design of your arrays
We focus on quality assurance followed by quality control process of array design
Maximum flexibility in array content and format to identify genome-wide expression levels of thousands of genes
Ensures highest level of coverage, uniformity, specificity and sensitivity of your arrays
Quick turnaround time from 3 days to a week
Cost-effective formats for your array designing
Complete support on array designing services