SNP
SNP (Single Nucleotide Polymorphism) array is a microarray hybridization-based technique. It is used to detect polymorphisms within a population.
At ArrayGen, we specialize in designing high-density probes for SNP studies. Our probes are tailored to provide detailed analysis of SNP variations.
This helps in identifying genome-wide patterns of allelic imbalance. We ensure our probes are of the highest quality and precision.
This guarantees accurate and comprehensive results for your SNP studies. Trust ArrayGen for advanced and reliable genomic analysis tools.
We are committed to enhancing your research with our expertise.
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Genome-wide tiling arrays covers both coding and non-coding SNP regions
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Genome-wide tiling arrays only for coding non-synonymous SNPs
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Validate known and novel SNPs from next generation sequencing (NGS) data using microarrays
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Arrays designed according to SNP regions of interest to the customer
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High density tiling probes from our in-house developed novel propritary tool which ensures 100% quality arrays
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25-mer probe length
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Probe selection based on %TM, %GC, PolyX, Self hyb, high hybridization specificity, unique to target and nonoverlaping
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Removal of probes in repeat regions
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Removal of probes mapping to multiple genomic locations
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We design eight probes per SNP target. 4 probes in sense and 4 probes in antisense with each middle base change with respect to reference base.
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Complete annotation to all designed probes for fast and easy data interpretation
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High confidence in the design of your arrays
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We focus on quality assurance followed by quality control process of array design
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Maximum flexibility in array content and format to identify genome-wide expression levels of thousands of genes
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Ensures highest level of coverage, uniformity, specificity and sensitivity of your arrays
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Quick turnaround time from 3 days to a week
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Cost-effective formats for your array designing
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Complete support on array designing services
| Catalog name | Human ClinVar SNP Genotyping 4x44K Array |
| Probe length | 21 to 31bp |
| No. of probe per SNP | 8 ( 4 sense and 4 Antisense) |
| Platform | Agilent |
| Total features | 45200 |
| Total Probes Designed | 45200 |
| Array format | 4x44K |
| Sequence & annotation source | UCSC, Dec. 2013 (hg38, GRCh38) Assembly, (NCBI dbSNPBuildID:138) |
| SNP List | View |
| Catalog name | Arabidopsis SNP Genotyping 1x1M SNP Array |
| Probe length | 21 to 31bp |
| No. of probe per SNP | 8 ( 4 sense and 4 Antisense) |
| Platform | Agilent |
| Total features | 974016 |
| Total Probes Designed | 974016 |
| Array format | 1x1M |
| Sequence & annotation source | Tair, Tair10 Assembly (NCBI dbSNPBuildID:138) |
| SNP List | View |