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Workshops / Training

ArrayGen > Services > Workshops / Training

     
  Workshops / Training
At present, Bioinformatics is a fast growing field both at the level of Academia and Industry. At ArrayGen, we are keen to impart the expertise in genome-informatics through workshops and training programs. ArrayGen runs a series of bioinformatics workshops to train researchers in developing their own data analysis methods, and enabling them choose the right tools in their specific research projects.Each workshop includes both lectures and hands-on sessions.


ArrayGen offers the following genomics and bioinformatics training courses with a focus on improving participants' practical applications, by using the appropriate theoretical knowledge:

Bioinformatics ( Understanding Genomics )
Custom Data Training Program with your own datasets till publication
CADD Training Program
Biomarker Development
Cancer Bioinformatics
CRISPR/Cas9 for Genome Editing Training Program
Phylogenomics
Advanced R / Perl / Bioperl / Python / Biopython / Java for Biologist
Microarray Data analysis
Next Generation Sequencing (NGS)
De novo genome and transcriptome assembly      Chip-Seq Data Analysis      RNA-Seq Data Analysis (Ref/Denovo)
Assay for Transposase-Accessible Chromatin (ATAC-seq) Data Analysis      Single Cell RNA-Seq (scRNA-seq)
long non-coding RNA sequencing(lncRNA-Seq) Data Analysis     DNA-Seq Data Analysis     
miRNA Data Analysis      Metagenomics Data Analysis      MethylSeq(DNA Methylation) Data Analysis
LncRNASeq      Genome Variant Data Analysis      Whole Genome Assembly      CircRNASeq
Genome / Exome Variant Data Analysis      RAD-Seq Data analysis

Objectives


To create an awareness with respect to the basic tools and techniques used in bioinformatics at industrial level
To provide complete hands-on-training in the basic tools and techniques
To inspire and motivate all life sciences to apply these techniques in their research programmes


## 10% Discount if you register before 25th April, 2024 . Hurry up!!



Short Term Industrial Bioinformatics Training for life sciences


Training Information
Period of TrainingOffline - 30 days / 15 days
Online - 30 days / 15 days

30 days program will involve all the three modules and 15 days program will involve two modules. Module I is mandatory in both the programs. The 15 days training will involve Module I and Module III or Module I and Module II.
Course Fee
For course fee please request you to contact us at info@arraygen.com

Training Starting Date Our training is one to one and training can also be started anytime and anydate as per the candidate convenience.
Training ScheduleOffline - 2 Hours Daily (Monday To Friday)
Online - 2 Hours Daily (Monday To Friday)
Module - IAdvanced Bioinformatics & basic programming
Topics - Introduction to Bioinformatics
- Understanding Genomics Bioinformatics
- Industry based Databases Data Retreival (NCBI,UCSC - Batch retreival Understanding)
- Gene and Genome data Vizualization - UCSC
- Gene Prediction and Functional annotation
- Industry based Tools execution (BLAST,BLAT etc)
- Standalone/offline BLAST Understanding for large scale genomic data handaling
- PCR primer designing and specificity check
- Basics of Programming (Python)
- Linux for NGS data analysis

NOTE: Module-I is designed as per the industry exposure which will be completely different than academic bioinformatic and with this it will be completely helpful to understand NGS & Microarray data analysis

Module - IIMicroarray (Gene Expression Profiling) Data Analysis
Topics - Microarray techniques detailed understanding
- Microarray Probe designing
- Introduction & Hands on practical on R for microarray data analysis
- Quality control & Normalization
- Differential Expressed Genes(UpRegulated & DownRegulated)
- Pathway & Gene Ontology Enrichment Analysis
- Pathway Network analysis using stringDB(PPI) & Cytoscape
- Pathway Network Analysis using KEGG Mapper tool for all DEG genes
- Different plots (Heatmap,volcano plot etc) using R
Module - IIINext Generation Sequencing (NGS) - RNASeq Data Analysis
Topics - Overview of NGS & detailed understanding
- Data Retrieval (NCBI SRA) & Introduction to data types
- Read Quality Check (FastQC & Cutadapt / fastp)
- Alignment of reads using reference Genome (HISAT2/STAR)
- Visualization of mapped reads (UCSC / IGV / ArrayGen Genome Browser)
- Gene Expression Quantification (Coverage,FPKM)
- Differential expression analysis( Cufflink, cuffmerge & cuffdiff / edgeR / Deseq2)
- Functinal Annotation ( DAVID / NCBI / Uniprot databases etc)
- Different plots (Heatmap,volcano plot etc) using R
- Pathway & Gene ontology enrichment analysis
- Pathway Network analysis using stringDB(PPI) & Cytoscape
- Pathway Network Analysis using KEGG Mapper tool for all DEG genes


NOTE: In module-III Candidate can select Any one NGS applications DNASeq/RNASeq/Metagenomics/Chipseq/Methylseq/miRNASeq/Denovo whole Genome Assembly etc for more details please visit at http://www.arraygen.com/ngs-courses.php

--- Candidates can also select multiple application of NGS as per the requirement

--- 30 Days program is designed by experts with 9+ years of experience and with the completion of course one can actively work on any NGS application as the need of Industry as well as for research. Candidate will be become independent to anlyze NGS datasets of their own.

EligibilityB.Tech. / B.Sc. / M.Tech. / M.Sc. in Biological Science, Computer science, Pharmacy, Agriculture, Biotechnology, Molecular biology, Medicine, clinical research and other relevant Qualification in the life sciences areas are eligible.
CertificateAll the participants will receive certificates on successful completion of training
Support- live recording during training as well as training manual will be provided
- Additional 2hrs of support after completion of training
Payment OptionsPaypal/Wire Transfer/cheque/Gpay/PhonePay/Online Gateway Razorpay(National and International)/Any UPI Payment
PlaceArrayGen, Pune, India
Contactinfo@arraygen.com

We also offer customised training in Microarray data analysis, if participant want to perform analysis with their own raw data as well as custom tools or cutom pipelines or automate parallel execution or as per the reference paper or new algorithm development as per the candidate request it comes under custom training. If microarray platform is Agilent or illumina it will come under custom training. Please send us inquiry and one of our business executive will contact you soon.

We also offer customised training in NGS data analysis, if participant want to perform analysis with their own raw data as well as custom tools or cutom pipelines or automate parallel execution or as per the reference paper or new algorithm development as per the candidate request it comes under custom training. If NGS platform is pacbio or nanopore it will come under custom training. Please send us inquiry and one of our business executive will contact you soon.

    







 
 
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ArrayGen Technologies Pvt. Ltd.
VTP Trade Park, Wing 4, Office No 237, Second Floor, URBAN NEST,
Shree Siddhivinayak Meera, Undri,
Pune-411060, Maharashtra
Phone No. :: +91 20-67026274
Mobile No :: +91 9673625446
Skype :: arraygen
E-mail :: info@arraygen.com

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